Browse of TCMCG042C24399 protein

CDS

Accession Number	TCMCG042C24399
gbkey	CDS
Protein Id	XP_016456535.1
Location	join(<1236..1369,1481..1610,1805..1858,2009..2158,2237..2388,2462..2546,2647..2919,3088..3234,3379..3534,4729..4796,5480..5602,5730..5829,5918..6030,6890..7162,7252..7452,8069..8162,8247..8318,9218..9316,9506..9628)
Gene	LOC107780498
GeneID	107780498
Organism	Nicotiana tabacum

Protein

Length	848aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA319578
db_source	XM_016601049.1
Definition	PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2, partial [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category	KL
Description	Prokaryotic RING finger family 4
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03400        [VIEW IN KEGG]
KEGG_ko	ko:K15505        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000724        [VIEW IN EMBL-EBI] GO:0000725        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006281        [VIEW IN EMBL-EBI] GO:0006302        [VIEW IN EMBL-EBI] GO:0006310        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006974        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009292        [VIEW IN EMBL-EBI] GO:0009294        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0033554        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044764        [VIEW IN EMBL-EBI] GO:0045003        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATTGGGCGTATTCCAAATGAATGGGCTCGATGTATTCTGCCGTTGGTGAGGGATAAGATGATTAGAATTGAAGGGCGTTGCAAATCGGCTCCTAATATATTGGCGATTATGGACTCTGTTCTTTTGTCCATCAGAGTGTATATTAATAGCTCCATGTTCCGTAAAAGCCATCAGACATCACTAAAGGCTAGATCTGCAGATGATACAGTTTTTCACCCCCTTCCAACTTTGTTCCATTTGCTCGGACTTACACCTTTTAAGAAGGCAGAATTCACTCCAGCTGATTTATACACGAGGAAGCGGCCTTTGAGCGAACAGGACAGCTCTGGTAGTCCTGCCTCAGTATTGCACGTGAACTTATCCAAAAGCTCTTCATCTGCAGATGGAGATAAAGTTGAGAATGATGAAACAATTTCTGATACTGATCTTGATTATATTGTTGGTTCAGCTGATAACTCGGAGATACAGGAAATGGAACCACCGAGTACACTCCAGTGCGAACTGCGACCTTATCAGAAGCAGTCGCTTCATTGGATGACACAACTGGAGAGGGGAAGAAGCACGGATGAAGCAGCAACAACTCTGCATCCATGTTGGGATGCTTACCGTCTCAAAGACGAGAGGGAGCTTGTTGTTTACTTGAATGCATTTTCGGGTGATGCGACCACTGAATTCCCGAGTACCCTTGAAATGGCTAGAGGAGGAATTTTGGCAGATTCAATGGGGTTAGGGAAGACTATAATGACTATAGCTCTCCTCCTCAGTCATTCTGAAAGAGGTAGATCATCAAGGAGCCAACCTACAAGCCAGCTGTCTGGTGAAAATGGTGAAGCTAGTAATATTTTAGGCCAATCTCCAACTTTTGCAAAGAAATCAGCAAAATTCTCTAGTCTTGATAAGCTCCTGAAACATAAGCCCACACTTATCTCTGGTGGCAATCTGATAATATGTCCAATGACACTACTAGGTCAATGGAAGGCAGAGATTGAAGCCCATGCACTACCTGGTGCTCTATCTCTTTATGTTTACTATGGGCAGACAAGATCAAAGGATACAAAAGTGCTTGCTCGAAGTGATGTCGTGCTGACAACATATGGAGTGTTGGCCTCCGAATTTTCTACAGAGAATGCTGAGGACAGTGGGGGACTTTTCTCTATTAGATGGTTTAGAGTGGTGCTTGATGAGGCACATACTATCAAATCTTCTAAAAGCCAAATCTCCAATGCTGCTGCTGCTCTTATTGCTGACCGTCGGTGGTGTCTTACTGGTACCCCTATCCAGAACAATCTGGAGGATATTTACAGTCTTCTTAGATTTTTGAGGGTCGAACCATGGGGAAGCTGGGCATGGTGGAACAAGCTTGTTCAGAAACCTTTTGAGGAGGGAGATGAGAGGGGGCTAAAGTTGGTTCAACAAATTTTAAGATCGATCATGTTGAGAAGAACAAAGTCTAGTACAGACAGGGAAGGCAGACCAATTTTAGTTCTACCACCAGCTGATATTCAAGTGACATATTGTGAACTAACAGAAGTAGAGCGCGACTTCTATGATGCATTGTATAAAAGATCCAAGGTGAAGTTTGATCAGTTTGTTGAGCAAGGACGAGTTCTCCACAACTATGCTTCTATATTGGAATTGCTTTTGCGACTTCGTCAATGTTGTGACCACCCATTTCTTGTAATGAGTCGAGGTGATACCCAAGAATTCTCTGATCTAAATAAGCTTGCTAAACGTTTCCTTAACGGTGGTAAGGAGACTGGAGAAGGCAAAGATGTTCCTTCACGTGCTTATATTCAGGAGGTTGTGGAAGAGTTGCGGAAGGGAGAACAGGGAGAATGTCCTATTTGTCTTGAAGCTTTTGAAGATGCAGTCTTGACTCCATGTGCTCATAGGTTATGTCGAGAGTGTCTCTTGACAAGCTGGCGAAGTTCTACCTCGGGCCTTTGTCCTGTTTGTAGAAACATTGTCAGTAAGCAGGAGCTTATAACAGCCCCGACAGATAGCCGCTTTCAGATTGATGTTGAGAAGAATTGGGTGGAGTCATCAAAAGTATCAGCCTTGTTGGGTGAACTAGAACGTCTTCGTTCCGTTGGCTCCAAAAGCATTGTTTTTAGTCAGTGGACTGCCTTCTTAGATCTATTGCAGATTCCTCTTTCTCGTAGTAATATTCCATTTGTTCGGCTTGATGGGACGTTAAACCAGCAACAACGTGAGAAAGTAATAAAGAAGTTCTCAGAAGAGGATGGCATATTGGTGTTGCTAATGTCTTTGAAGGCTGGTGGTGTTGGGATAAACCTGACGGCTGCATCCAATGCTTTTGTCATGGATCCGTGGTGGAATCCAGCTGTTGAGGAACAAGCGGTCATGCGCGTTCATCGTATTGGACAAACTCAGCAAGTAATGATCAAACGATTCATTGTGCAGGGTTCAGTTGAGGAAAGAATGGAGGCAGTACAAGCTAGGAAGCAACGGATGATTTCTGGTGCTTTGACGGACCAAGAAGTTCGGACAGCAAGAATTGAGGAACTTAAGATGCTTTTTGCATAG

Protein:   IGRIPNEWARCILPLVRDKMIRIEGRCKSAPNILAIMDSVLLSIRVYINSSMFRKSHQTSLKARSADDTVFHPLPTLFHLLGLTPFKKAEFTPADLYTRKRPLSEQDSSGSPASVLHVNLSKSSSSADGDKVENDETISDTDLDYIVGSADNSEIQEMEPPSTLQCELRPYQKQSLHWMTQLERGRSTDEAATTLHPCWDAYRLKDERELVVYLNAFSGDATTEFPSTLEMARGGILADSMGLGKTIMTIALLLSHSERGRSSRSQPTSQLSGENGEASNILGQSPTFAKKSAKFSSLDKLLKHKPTLISGGNLIICPMTLLGQWKAEIEAHALPGALSLYVYYGQTRSKDTKVLARSDVVLTTYGVLASEFSTENAEDSGGLFSIRWFRVVLDEAHTIKSSKSQISNAAAALIADRRWCLTGTPIQNNLEDIYSLLRFLRVEPWGSWAWWNKLVQKPFEEGDERGLKLVQQILRSIMLRRTKSSTDREGRPILVLPPADIQVTYCELTEVERDFYDALYKRSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAKRFLNGGKETGEGKDVPSRAYIQEVVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLTSWRSSTSGLCPVCRNIVSKQELITAPTDSRFQIDVEKNWVESSKVSALLGELERLRSVGSKSIVFSQWTAFLDLLQIPLSRSNIPFVRLDGTLNQQQREKVIKKFSEEDGILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRVHRIGQTQQVMIKRFIVQGSVEERMEAVQARKQRMISGALTDQEVRTARIEELKMLFA